BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038H08SP1|AL430623
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig666 1777 0.0
>3x_Contig666
Length = 2037
Score = 1777 bits (896), Expect = 0.0
Identities = 904/906 (99%), Gaps = 1/906 (0%)
Strand = Plus / Plus
Query: 1 gatccctacaatgaggatttctacttccaagtttataaaatcattcaaaggggtgtcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gatccctacaatgaggatttctacttccaagtttataaaatcattcaaaggggtgtcact 283
Query: 61 ccatctgaatctaataaggattctattgctaaagcatatttagagcactcgggtcacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ccatctgaatctaataaggattctattgctaaagcatatttagagcactcgggtcacaga 343
Query: 121 ttaggaggtcgttacaagagaactgacgtcgcgttacagagaatgcaatctcaggtcgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ttaggaggtcgttacaagagaactgacgtcgcgttacagagaatgcaatctcaggtcgag 403
Query: 181 aaggctgttaccgttgcgaaagaaagaccacagaaaagtaagggtgggttggataatgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aaggctgttaccgttgcgaaagaaagaccacagaaaagtaagggtgggttggataatgcc 463
Query: 241 aaagagggtgtcttgggtaaaatctcagctactaggaactcaaaagctccaagaaagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aaagagggtgtcttgggtaaaatctcagctactaggaactcaaaagctccaagaaagcaa 523
Query: 301 ttacaaatcccaactcacaaagaggattctccagcgttgtcttctcaatcaagctcagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttacaaatcccaactcacaaagaggattctccagcgttgtcttctcaatcaagctcagcc 583
Query: 361 ctagatgaggtgtctgaatctttgcaaggcgtggatatcaatgccaaaagaagaagatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctagatgaggtgtctgaatctttgcaaggcgtggatatcaatgccaaaagaagaagatca 643
Query: 421 tcttatgctttgagttcttcagtggaccatcgtacagttttatcccgttctggtggccgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tcttatgctttgagttcttcagtggaccatcgtacagttttatcccgttctggtggccgt 703
Query: 481 aagttcattttatcattgattgaaactgtttacgaagaagtgcttgaactagaagctcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 aagttcattttatcattgattgaaactgtttacgaagaagtgcttgaactagaagctcaa 763
Query: 541 ttgagatccggtcaacagccggacagttcaaaattatgggaggcgctacacgttgaggac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ttgagatccggtcaacagccggacagttcaaaattatgggaggcgctacacgttgaggac 823
Query: 601 cacggttttgacgtttctcccttcatttccatcttatctttcgacaaaggtatcaagatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 cacggttttgacgtttctcccttcatttccatcttatctttcgacaaaggtatcaagatt 883
Query: 661 atgccacgtattatgaatttcttgtcaagagaagagaagattaagcttttcaactgcttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 atgccacgtattatgaatttcttgtcaagagaagagaagattaagcttttcaactgcttc 943
Query: 721 ttcaaggaactttctcatttgaatgtcattgtcatatcatcgtacaagactactccactt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 ttcaaggaactttctcatttgaatgtcattgtcatatcatcgtacaagactactccactt 1003
Query: 781 cctactaaagatcaactgaagaagatggaattgttccaatctgtgtttttgaagatcatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 cctactaaagatcaactgaagaagatggaattgttccaatctgtgtttttgaagatcatt 1063
Query: 841 gtttcgttcttatccagttcagcagagttttttggaggtaatgagtctactaataaatst 900
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 1064 gtttcgttcttatccagttcagcagag-tttttggaggtaatgagtctactaataaatgt 1122
Query: 901 cattca 906
||||||
Sbjct: 1123 cattca 1128
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7400
Number of Sequences: 1807
Number of extensions: 7400
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)